Updates cTWAS input data with merged region data

Source: R/ctwas_merge_regions.R

Updates cTWAS input data with merged region data

update_merged_region_data(
  region_data,
  merged_region_data,
  region_info,
  merged_region_info,
  LD_map,
  merged_LD_map,
  snp_map,
  merged_snp_map,
  screened_region_L,
  merged_region_L,
  merged_region_id_map
)

Arguments

region_data

a list of original region data.

merged_region_data

a list of merged region data.

region_info

a data frame of original region definitions.

merged_region_info

a data frame of original region definitions.

LD_map

a data frame of original LD map.

merged_LD_map

a data frame of merged LD map.

snp_map

a list of original SNP info.

merged_snp_map

a list of merged SNP info.

screened_region_L

a vector of L for original screened regions.

merged_region_L

a vector of L for merged regions.

merged_region_id_map

a data frame of new region IDs and original regions IDs.

Value

a list with updated region_data, region_info, LD_map, snp_map, and L.