Convert variant IDs from Open GWAS format or PredictDB weight format

Source: R/ctwas_utils.R

Convert variant IDs from Open GWAS format or PredictDB weight format

convert_to_ukb_varIDs(varIDs)

Arguments

varIDs

a vector of variant IDs from Open GWAS format ("chr_pos_ref_alt") or PredictDB weight format (“chr_pos_ref_alt_build” or “chr:pos_ref_alt_build”)

Value

a vector of variant IDs in the format of "chr:pos_ref_alt"