R/ctwas_diagnose_LD_mismatch.R
get_problematic_genes.Rd
Gets problematic genes from problematic SNPs
get_problematic_genes(problematic_snps, weights, z_gene, z_thresh = 3)
a character vector of problematic SNP rsIDs.
a list of weights
A data frame with columns: "id", "z", giving the z-scores for genes.
cutoff of abs(z-scores) to select genes with large effect sizes
a vector of problematic genes